Methods in Microbiomics

Data Preprocessing

  • Data Preprocessing

Assembly

  • Genome Assembly
  • Metagenomic Assembly

Taxonomic Profiling

  • Amplicon Sequencing
  • Taxonomic Profiling of Metagenomes
  • zAMP: Amplicon-based Metagenomics Pipeline for reproducible and scalable Microbiota Profiling

Comparative Genomics

  • SNV Analysis on Metagenomic Data
  • zDB: Comparative Genomics Analysis

Transcriptomics

  • Metatranscriptomics without Metagenomics (defined Community)
  • Metatranscriptomics with Metagenomics

Tn-Seq

  • TN-Seq Protocol
Methods in Microbiomics
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